µP

microPublication Biology

Oscar Mendoza Andrade1ORCID logo, Zach Wright1ORCID logo, Sahel Ghasemzadeh1ORCID logo, and Dan T Bergstralh 1§ORCID logo

1Division of Biological Sciences, University of Missouri, Columbia, MO, 65201, USA.

§Correspondence to: Dan T Bergstralh (dan.bergstralh@missouri.edu)

Abstract

Description

Methods

Reagents

Extended Data

  • Description: Gene lists used to identify the eight newly identified clusters of previously ‘unannotated follicular’ cells. Genes in each list demonstrate significantly higher expression in that cluster compared to all other cells in the group examined in this study (p < 0.05). The genes are ranked according to their Wilcoxon z-score, which reflects the strength and consistency of differential expression across cells in the cluster. Higher values indicate stronger upregulation relative to the rest of the dataset. Also shown are the fold change in average gene expression between the cluster and all other cells, the p-value from the Wilcoxon rank-sum test (p value), and the adjusted p-value controlling for multiple comparisons using the Benjamini–Hochberg procedure (adjusted pval). Mean expression values are reported as UMI (Unique Molecular Identifier) counts within the cluster (mean expression in cluster) and in the remaining cells (mean expression outside the cluster).. Resource Type: Dataset. DOI: 10.22002/fjt12-sdx74

Acknowledgements

Funding

Author Contributions

  • Oscar Mendoza Andrade: Data curation, Methodology, Formal analysis, Conceptualization, Writing - original draft
  • Zach Wright: Formal analysis, Writing - review & editing
  • Sahel Ghasemzadeh: Writing - review & editing, Formal analysis
  • Dan T Bergstralh : Supervision, Funding acquisition, Project administration, Conceptualization, Formal analysis, Writing - original draft, Writing - review & editing

Reviewed By

Anonymous

History

  • Received: 6/26/2025
  • Revision Received: 7/10/2025
  • Accepted: 7/10/2025
  • Published Online: 7/10/2025

Copyright

© 2025 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Citation

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The microPublication project is supported by

The National Institute of Health -- Grant #: 1U01LM012672-01

microPublication Biology:ISSN: 2578-9430